Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKLQLKKWKCRENDIEAVHNNKGYAYQRKLDALEEVRKGYYPIKRAIDLVLSIVLLFLTFPIMFIFAIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSMCKNAEKNGAQWADKDDDRITNVGKFIRKTRIDELPQLINVVKGEMSFIGPRPERPEFVELFSSEVIGFEQRCLVTPGLTGLAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYISIRTLMVVITGEGSR |
| 4Q4A Chain:A ((160-195)) | ----------------------------------------------SINVKLSSVLIFLIPPIVLLF---VWLTKKGNPLFRKIQ------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4Q4A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -14981 for 136 contacts (-110.2/contact) +
2D Compatibility (PS) -3255 + (NN) 3673 + (LL) 13884
1D Compatibility (HY) -6400 + (ID) 650
Total energy: -7729.0 ( -56.83 by residue)
QMean score : -0.083
|
|
|