Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPLEIPTKYDSLLKKKVSLKTSFTFMLIIVLIIWSFIYTGFNFGDLMIGIPQIGDLFKQMIPPDFEYLQQITTPMLDTIRMAIVSTVLGSIVSIPIALLCASNIVHQKWISIPSRFILNIVRTIP---DLLLAAIFVAVFGIGQIP----GILALFILTICIIGKLLYESLETIDPGPMEAMTAVGANKIKWIVFGVVPQAISSFMSYVLYAFEVNIRASAVLGLVGAGGIGLFYDQTLGLFQYPKTATIILFTLVIVVVIDYISTKVRAHLA |
| 4YMU Chain:D ((22-167)) | -----------------------------------------------------------------------------TLKLTFLAVTIGVLMGLFIALMKMSSI---KPIKLVASSYIEVIRGTPLLVQLLLIYNGLMQFGM-NIPAFTAGVSALAINSSAYVAEIIRAGIQAVDPGQNEAARSLGMTHAMAMRYVIIPQAIKNILPALGNEFIVMLKESAIVSVIG---------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YMU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131034 for 966 contacts (-135.6/contact) +
2D Compatibility (PS) -14301 + (NN) 806 + (LL) 10504
1D Compatibility (HY) -11200 + (ID) 1850
Total energy: -147075.0 ( -152.25 by residue)
QMean score : 0.256
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