Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIDIHNHILPNIDDGPTNETEMMDLLKQATTQGVTEIIVTSHHLHPRYTTPIEKVKSCLNHIESLEEVQALNLKFYYGQEIRITDQILNDIDRKVITGINDSRYLLIEFPSNEVPHYTDQLFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALSQVTTA-----SLAGISGKKIRKLAIQMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYYE--DMNGFISNAKLVVDDKKIPKRMPQQDYKQKRWFGL
3QY8 Chain:A ((1-243))
MIDIHSHIVFDVDDGPKSREESKALLAESYRQGVRTIVSTSHRRKGMFETPEEKIAENFLQVREIAKEVASDLVIAYGAEIYYTPDVLDKLEKKRIPTLNDSRYALIEFSMNTPYRDIHSALSKILMLGITPVIAHIERYDALENNEKRVRELIDMGCYTQVNSSHVLKPKLFGERYKFMKKRAQYFLEQDLVHVIASDMHNLDGRPPHMAEAY-DLVTQKYGEAKAQELFIDNPRKIVMDQLI-----------------
General information:
TITO was launched using:
RESULT:
Template:
3QY8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121896 for 1974 contacts (-61.8/contact) +
2D Compatibility (PS) -25219 + (NN) -10156 + (LL) 908
1D Compatibility (HY) -10400 + (ID) 4200
Total energy: -170963.0 ( -86.61 by residue)
QMean score : 0.562
(partial model without unconserved sides chains):
PDB file :
Tito_3QY8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QY8-query.scw
PDB file :
Tito_Scwrl_3QY8.pdb
: