Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLTVVGLGYIGLPTSIMFAKHGV--DVLGVDINQQT----IDKLQSGQISI--EEPGLQEVYEEVLSSGKLKVSTTPEAS-----DVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLEKGNTIIVESTIAPKTMDDFVKPVIEN-LGFTIGEDICLVHCPERVLPGKILEELVHNNRIIGGVTKACIEAGKYVYRTFVQ-GEMIETDARTAEMSKLMENTYRDVNIALANELTKICNNLNINVLDVIEMANKHPRVNIHQ----PGPGVGGHCLAVDPYFI-----IAKD----PENAKLIQT-GREINNSMPAYVVDTT----KQIIKALSGNKVTVFGLTYKGDVDDIRESPAFDIYELLNQEPDIEVCAYDPHVELDF----VEHDMSHAVKDASLVLILSDHSEFKNLSDSHFDKMKHK---VIFDTKNVVKSSFEDVSYYNYGNIFNFIDK |
| 3G79 Chain:A ((20-454)) | -KIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFEC--TPDFSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMAKQILEEESGLKAGEDFALAHAPERVMVGRLLKNIREHDRIVGGIDEASTKRAVELYSPVLTVGQVIPMSATAAEVTKTAENTFRDLQIAAINQLALYCEAMGINVYDVRTGVDSLKGEGITRAVLWPGAGVGGHCLTKDTYHLERGVKIGRGELDYPEGADSIYVLARKVNDFMPAHMYNLTVAALERLGKKMDGSKVAMLGWAFIKDSDDARNTPS-EPYRDLCLKAGASVMVHDPYV-VNYPGVEISDNLEEVVRNADAIVVLAGHSAYSSLKADWAKKVSAKANPVIIDGRNVIE-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G79.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -235999 for 3163 contacts (-74.6/contact) +
2D Compatibility (PS) -42268 + (NN) -10088 + (LL) 1260
1D Compatibility (HY) -29200 + (ID) 6750
Total energy: -323045.0 ( -102.13 by residue)
QMean score : 0.449
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