Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIFSQNLFRCPTPTCI----VCRNWESNFSLLGPTPQLALPVEFLFEILCVGAPD
2JX1 Chain:A ((3-25))
--------KCPTPGCDGSGHITGNYASHRSL------------------------
General information:
TITO was launched using:
RESULT:
Template:
2JX1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5685 for 58 contacts (-98.0/contact) +
2D Compatibility (PS) -1950 + (NN) -1374 + (LL) 2340
1D Compatibility (HY) -800 + (ID) 450
Total energy: -7919.0 ( -136.53 by residue)
QMean score : 0.297
(partial model without unconserved sides chains):
PDB file :
Tito_2JX1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JX1-query.scw
PDB file :
Tito_Scwrl_2JX1.pdb
: