Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLSKLPLFNHFANIRIQPKLIIKLFLTLIIIVTYTFVSGLSVDYKKLLSEAGLSETSLAQIKIFSQISIFFSRVFSVLFTFLIILVISRIMRSDANTKSIFSATLSYILFTNAISLIILTIQISAGLSLIDYSITSLNIFAKGNRILGTFDLQFFVQAYILTVMLIGTSKLSIRASTIWGIIYLILIITFSLISISIQ |
| 2K9J Chain:B ((697-712)) | -------------------------------------------------------------------LLSVMGAILLIGLAAL-------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2K9J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -5531 for 54 contacts (-102.4/contact) +
2D Compatibility (PS) -1483 + (NN) 813 + (LL) 17736
1D Compatibility (HY) -2000 + (ID) 50
Total energy: 9485.0 ( 175.65 by residue)
QMean score : 0.184
|
|
|