Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAMIKMSPEEIRAKSQSYGQGSDQIRQILSDLTRAQGEIAANWEGQAFSRFEEQFQQLSPKVEKFAQLLEEIKQQLNSTADAVQEQDQQLSNNFGLQ
3O9O Chain:A ((4-92))
---IKLTPEELRSSAQKYTAGSQQVTEVLNLLTQEQAVIDENWDGSTFDSFEAQFNELSPKITEFAQLLEDINQQLLKVADIIEQTDADIAS-----
General information:
TITO was launched using:
RESULT:
Template:
3O9O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -665 for 503 contacts (-1.3/contact) +
2D Compatibility (PS) -9693 + (NN) -70 + (LL) 736
1D Compatibility (HY) -8800 + (ID) 2050
Total energy: -20542.0 ( -40.84 by residue)
QMean score : 0.585
(partial model without unconserved sides chains):
PDB file :
Tito_3O9O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O9O-query.scw
PDB file :
Tito_Scwrl_3O9O.pdb
: