Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVKNHNPKNEMQDMLTPLDAEEAAKTKLRLDMREIPKSSIKPEHFHLMYLLEQHSPYFIDAELTELRDSFQIHYDINDNHTPFDNIKSFTKNEKLRYLLNIKNLEEVNRTRYTFVLAPDELFFTRDGLPIAKTRGLQNVVDPLPVSEAEFLTRYKALVICAFNEKQSFDALVEGNLELHKGTPFETKVIEAATLDLLTAFLDEQYQKQEQDYSQNYAYVRKVGHTVFKWVAIGMTTLSVLLIAFLAFLYFSVMKHNERIEKGYQAFVKDDYTQVLNTYDDLDGKKLDKEALYIYAKSYIQTNKQGLEKDKKENLLNNVTPNSNKDYLLYWMELGQGHLDEAINIATYLDDNDITKLALINKLNEIKNNGDLSNDKRSEETKKYNDKLQDILDKEKQVKDEKAKSEEEKAKAKDEKLKQQEENEKKQKEQAQKDKEKRQEAERKK |
2YNQ Chain:A ((6-154)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QPKQEAYIQSTELFLQNKYSDVITTLEDYAPEDMPYVIQYELASSYVMT--ESLTEEQRQTVSNNITLKTDEQYMLYWIYIGRSQSEEALELARTIEDRDLIVYALLKYREQIKGDTDLSGDEKQKKLDEIDQEIKEYERERKESEAQLEE----------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YNQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -23955 for 1005 contacts (-23.8/contact) +
2D Compatibility (PS) -16349 + (NN) -11222 + (LL) 23156
1D Compatibility (HY) -10000 + (ID) 1700
Total energy: -40070.0 ( -39.87 by residue)
QMean score : 0.639
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