Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKISKYIAIASLSVAVTVSAPQTTNSTAFAKSSAEVQQTQQASIPASQKANLGNQNIMAVAWYQNSAEAKALYLQGYNSAKTQLDKEIKKNKGKHKLAIALDLDETVLDNSPYQGYASIHNKPF-PEGWHEWVQAAKAKPVYGAKEFLKYADKKGVDIYYISDRDKEKDLKATQKNLKQQGIPQAKKSHILLKGKDDKSKESR-RQMVQKDHKLVMLFGDNLLDFTDP--KEATAESREALIEKHKDDFGKKYIIFPNPMYGSWEATIYNNNYKASDKAKDKLRKNAIKQFDPKTGEVK |
| 3PCT Chain:A ((3-253)) | ----------------------------------------NQQAVEQANQAKLQQQVAMGLIWTQQSGEYAALAHQAFNSAKMAFDHAK-------KKAVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWTKWVDARQSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDKTLLLK-KDKSNKSVRFKQVEDMGYDIVLFVGDNLNDFGDATYKKSNAERRD-FVAKNSKAFGKKFIVLPNTQYGDWEGGLDKNYFKGDSQSKLDVRAKAIHAWDGK----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PCT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6107 for 1795 contacts (3.4/contact) +
2D Compatibility (PS) -26189 + (NN) -15894 + (LL) 3676
1D Compatibility (HY) -15200 + (ID) 4300
Total energy: -51800.0 ( -28.86 by residue)
QMean score : 0.448
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