Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVPEEKGSITLSKEAAIIFATAKFKPFKNRIKNNPLKTNPFLKLHENKKS
2LJU Chain:A ((64-75))
-----------TRELAIAYAVAH---------------------------
General information:
TITO was launched using:
RESULT:
Template:
2LJU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23 for 42 contacts (-0.5/contact) +
2D Compatibility (PS) -1402 + (NN) -896 + (LL) 1792
1D Compatibility (HY) -400 + (ID) 250
Total energy: -1179.0 ( -28.07 by residue)
QMean score : 0.284
(partial model without unconserved sides chains):
PDB file :
Tito_2LJU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LJU-query.scw
PDB file :
Tito_Scwrl_2LJU.pdb
: