Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKMIIAIVQDQDSQELADQLVKNNFRATKLATTGGFLRAGNTTFLCGVNDDRVDEILSVINQTCGNREQLVSPITPMGGSADSYIPYPVEVEVGGATVFVMPVDAFHQF
4D3G Chain:A ((20-128))
MKMIIAIVQDQDSQELADQLVKNNFRATKLATT-------NTTFLCGVNDDRVDEILSVINQTCGNR-------------------------VGGATVFVMPVDAFHQF
General information:
TITO was launched using:
RESULT:
Template:
4D3G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53535 for 502 contacts (-106.6/contact) +
2D Compatibility (PS) -8294 + (NN) -3610 + (LL) 1152
1D Compatibility (HY) -11600 + (ID) 3850
Total energy: -79737.0 ( -158.84 by residue)
QMean score : 0.695
(partial model without unconserved sides chains):
PDB file :
Tito_4D3G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4D3G-query.scw
PDB file :
Tito_Scwrl_4D3G.pdb
: