Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKRMRDDIKMVFEQDPAARSTLEVITTYAGLHAVWSHLIAHKLYNQKKYVAARAISQISRFFTGIEIHPGAKIGKRLFIDHGMGVVIGETCTIGDNVTIYQGVTLGGTGKERGKRHPDIGDNVLIAAGAKVLGNIKINSNVNIGANSVVLQSVPSYSTVVGIPGHIVKQDGVRVGKTFDHRHLPDPIYEQIKHLERQLEKTRNGEIQDDYII
4HZC Chain:A ((91-260))
----LRVDIQAVYDRDPAYSRFMDPVLYLKGFHAIQTHRLAHWLYKQGRKDFAYYLQSRSSSIFQTDIHPAARLGSGLFLDHATGLVVGETAVVEDNVSILHGVTLGGTGKSSGDRHPKIRQGVLIGAGAKILGNIQVGQCSKIAAGSVVLKSVPHNVTVAGVPARIIGETGCT---------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4HZC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -119185 for 1383 contacts (-86.2/contact) +
2D Compatibility (PS) -18160 + (NN) -5072 + (LL) 3100
1D Compatibility (HY) -12800 + (ID) 3800
Total energy: -155917.0 ( -112.74 by residue)
QMean score : 0.618
(partial model without unconserved sides chains):
PDB file :
Tito_4HZC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HZC-query.scw
PDB file :
Tito_Scwrl_4HZC.pdb
: