Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEKKGFNFNIIKNDPLDGHKGTNIGSISLDNIAPVFIDVANKEAFIDIGGMHARAKVEKGVKWITDKAAVEGDEAKEYWLCWVTTERNEQGPYYAGLTACYLLVNKAIRRGYKSMPEHVNMMDKSMKHHIIIDQIGDENKAILKDFLMNHDEGMWKLSSDALHQAFN |
| 3SDE Chain:A ((81-138)) | ---------TILKSRPLRIRFATHGAALTVKNLSPVVSNELLEQAFSQFG------PVEKAVVVVDDRGRATG----------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SDE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2152 for 253 contacts (-8.5/contact) +
2D Compatibility (PS) -5805 + (NN) 673 + (LL) 7672
1D Compatibility (HY) -3600 + (ID) 850
Total energy: -4062.0 ( -16.06 by residue)
QMean score : 0.046
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