Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAITKINDCFELLSMVTYADKLKSLIKKEFSISFEEFAVLTYISENKEKEYYLKDIINHLNYKQPQVVKAVKILSQEDYFDKKRNEHDERTVLILVNAQQRKKIESLLSRVNKRITEANNEIEL
1P4X Chain:A ((132-244))
-------DSKEFLNLMMYTMYFKNIIKKHLTLSFVEFTILAIITSQNKNIVLLKDLIETIHHKYPQTVRALNNLKKQGYLIKERSTEDERKILIHMDDAQQDHAEQLLAQVNQLLADKDH----
General information:
TITO was launched using:
RESULT:
Template:
1P4X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49755 for 707 contacts (-70.4/contact) +
2D Compatibility (PS) -12123 + (NN) -7071 + (LL) 1384
1D Compatibility (HY) -11200 + (ID) 1900
Total energy: -80665.0 ( -114.09 by residue)
QMean score : 0.599
(partial model without unconserved sides chains):
PDB file :
Tito_1P4X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P4X-query.scw
PDB file :
Tito_Scwrl_1P4X.pdb
: