Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLHFAILFWLALIFLVAATFILVLMKKTGKESKKESYLSFTVILYIFGFAILIYTFIFGVL
3AM6 Chain:A ((11-61))
------IAQWIVFAIMAAAAIAFGVAVHFRP--LKSAYYINIAICTIAATAYYAM-------
General information:
TITO was launched using:
RESULT:
Template:
3AM6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42118 for 269 contacts (-156.6/contact) +
2D Compatibility (PS) -5138 + (NN) -5447 + (LL) 1468
1D Compatibility (HY) -1600 + (ID) 450
Total energy: -53285.0 ( -198.09 by residue)
QMean score : 0.576
(partial model without unconserved sides chains):
PDB file :
Tito_3AM6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3AM6-query.scw
PDB file :
Tito_Scwrl_3AM6.pdb
: