Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTMKDIIRDGHPTLRQKAAELELPLTKEEKETLIAMREFLVNSQDEEIAKRYGLRSGVGLAAPQINISKRMIAVLIPDDGSGKSYDYMLVNPKIVSHSVQEAYLPTGEGCLSVDDNVAGLVHRHNRITIKAKDIEGNDIQLRLKGYPAIVFQHEIDHLNGVMFYDHIDKNHPLQPHTDAVEV
1LMH Chain:A ((2-183))
-LTMKDIIRDGHPTLRQKAAELELPLTKEEKETLIAMREFLVNSQDEEIAKRYGLRSGVGLAAPQINISKRMIAVLIPDDGSGKSYDYMLVNPKIVSHSVQEAYLPTGEGCLSVDDNVAGLVHRHNKITIKAKDIEGNDIQLRLKGYPAIVFQHEIDHLNGVMFYDHIDKDHPLQPHTDAVEV
General information:
TITO was launched using:
RESULT:
Template:
1LMH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83243 for 1404 contacts (-59.3/contact) +
2D Compatibility (PS) -19039 + (NN) -5426 + (LL) 208
1D Compatibility (HY) -24800 + (ID) 9000
Total energy: -141300.0 ( -100.64 by residue)
QMean score : 0.779
(partial model without unconserved sides chains):
PDB file :
Tito_1LMH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1LMH-query.scw
PDB file :
Tito_Scwrl_1LMH.pdb
: