Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFKKLINKKNTINNYNEELDSSNIPEHIAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKITRIASDIGVKYLTLYAFSTENWSRPESEVNYIMNLPVNFLKTFLPELIEKNVKVETIGFTDKLPKSTIEAINNAKEKTANNTGLKLIFAINYGGRAELVHSIKNMFDELHQQGLNSDIIDETYINNHLMTKDYPDPELLIRTSGEQRISNFLIWQVSYSEFIFNQKLWPDFDEDELIKCIKIYQSRQRRFGGLSEE
3WYI Chain:A ((17-247))
----------------EELDSSNIPEHIAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKITRIASDIGVKYLTLYAFSTENWSRPESEVNYIMNLPVNFLKTFLPELIEKNVKVETIGFTDKLPKSTIEAINNAKEKTANNTGLKLIFAINYGGRAELVHSIKNMFDELHQQGLNSDIIDETYINNHLMTKDYPDPELLIRTSGEQRISNFLIWQVSYSEFIFNQKLWPDFDEDELIKCIKIYQSRQ---------
General information:
TITO was launched using:
RESULT:
Template:
3WYI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -95133 for 1838 contacts (-51.8/contact) +
2D Compatibility (PS) -24565 + (NN) -9763 + (LL) 1268
1D Compatibility (HY) -33200 + (ID) 11550
Total energy: -172943.0 ( -94.09 by residue)
QMean score : 0.652
(partial model without unconserved sides chains):
PDB file :
Tito_3WYI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WYI-query.scw
PDB file :
Tito_Scwrl_3WYI.pdb
: