Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYNYHLLEDRDVLCIDQKSFFASVSCIEKGLDPL--ETKLAVVADTKRQGSVILAATPKLKELGIK----TGSRLFEIPHRNDIYIINPSMRKYLNVSVAISKIALRYIPPEDLHQYSIDEFFMDVTDSYHRFSSTVHAFCERLKREIYEETGIYCTVGIGSNMLLSKIAMDVEAKHSQNGIAEWRYQDVPTKLWPIQPLRDFWGINRRTEAKLNKRGIFTIGDLAKYPYKFLKKEFGILGVDMHLHANGIDQSKVREKHKISNPSICKSQILMRD-YHFDEAKVVMQELIEDVASRVRARKKVARTIHFAFGYSDEGGVHKQYTLKDPTNLEKDIYKVVMHFADKLCNKQALYRTLSISLSQFINEDERQLSLFEDEYQRKRDECLAKTIDQLHLKYGKGIVSKAVSFTEAGTKHGRLGLMAGHKM |
| 4Q43 Chain:A ((3-275)) | ---------RKIIHVDMDCFFAAV---EMRDNPALRDIPIAIGGSRERRGVISTANYPA-RKFGVRSAMPTGMALKLCPH---LTLLPGRFDAYKEASNHIREIFSRYT--SRIEPLSLDEAYLDVTDSVHCHGSAT-LIAQEIRQTIFNELQLTASAGVAPVKFLAKIASDMNKPNGQFVITP---AEVPAFLQTL-PLAKIPGVGKVSAAKLEAMGLRTCGDVQKCDLVMLLKRFGKFGRILWERSQGIDERDVNSER--LRKSVGVERTMAEDIHHWSECEAIIERLYPELERRL--------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q43.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -113637 for 1978 contacts (-57.5/contact) +
2D Compatibility (PS) -28576 + (NN) -13503 + (LL) 10836
1D Compatibility (HY) -13600 + (ID) 3700
Total energy: -162180.0 ( -81.99 by residue)
QMean score : 0.389
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