Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTTVLFVGLGLIGGSLASNIKYHNPNTNIIAYDADTSQLDKAKSIGIINEKCLNYSEAIKKADVIIYATPVAITNKYLSELIDMPTKPGVIVSDTGSTKAMIQQHESNLLKHNIHLVSGHPMAGSHKSGVLNAKKHLFENAYYILVYNEPRNEQAANTLKELLSPTLAKFI-VTTAEEHDYVTSVVSHLPHIVASSLVHVSQ--KNGQEHHLVNKLAAGGFRDITRIASSNAQMWKDITLSNKTYILEMIRQLKSQFQDLERLIESNDSEKLLSFFAQAKSYRDALPAKQLGGLNTAYDLYVDIPDESGMISKVTYIMSLHNISISNLRILEVREDIYGALKISFKNPTDRERGMQALSDFDCYIQ |
4WJI Chain:A ((6-286)) | --TIALIGIGLIGSSIARDIREKQLAGTIVVTTRSEATLKRAGELGLGDRYTLSAAEAVEGADLVVVSVPVGASGAVAAE-IAAHLKPGAIVTDVGSTKGSVIAQMAPHLPKDVHFVPGHPIAGTEHSGPDAGFAGLFRGRWCILTPPAGTDEEAVARLR-LFWETLGSMVDEMDPKHHDKVLAIVSHLPHIIAYNIVGTADDLETVTESEVI-KYSASGFRDFTRLAASDPTMWRDVCLHNKDAILEMLARFSEDLASLQRAIRWGDGDKLFDLFTRTRAIRRSI-------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WJI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -83034 for 2119 contacts (-39.2/contact) +
2D Compatibility (PS) -28638 + (NN) -8205 + (LL) 5604
1D Compatibility (HY) 2800 + (ID) 2050
Total energy: -113523.0 ( -53.57 by residue)
QMean score : 0.341
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