Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRLGKMSDLDQILNLVEEAKELMKEHDNEQWDDQYPLLEHFEEDIAKDYLYVLEENDKIYGFIVVDQDQAEWYDDIDWPVNREGAFVIHRLTGSKEY--KGAATELFNYVIDVVKARGAEVILTDTFALNKPAQGLFAKFGFHKVGEQLMEYPPYDKGEPFYAYYKNLKE
2FIA Chain:A ((3-156))
-IRVADEKELPMILQFLTEVKAYMDVVGITQWTKDYPSQGDIQEDITKKRLYLLVHEEMIFSMATFCMEQEQ---DFVW---------LKRFATSPNYIAKGYGSLLFHELEKRAVWEGRRKMYAQTNHTNHRMIRFFESKGFTKIHESL-QMNRLDFG-SFYLYVKEL--
General information:
TITO was launched using:
RESULT:
Template:
2FIA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61680 for 1105 contacts (-55.8/contact) +
2D Compatibility (PS) -16366 + (NN) -8023 + (LL) 1332
1D Compatibility (HY) -11600 + (ID) 2300
Total energy: -98637.0 ( -89.26 by residue)
QMean score : 0.441
(partial model without unconserved sides chains):
PDB file :
Tito_2FIA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FIA-query.scw
PDB file :
Tito_Scwrl_2FIA.pdb
: