Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIISISETPNHNTMKITLSESREGMTSDTYTKVDDSQPAFINDILKVEGVKSIFHVMDFISVDKENDANWETVLPKVEAVFE
2K1H Chain:A ((1-82))
MEIIAISETPNHNTMKVSLSEPRQDNSFTTYTAAQEGQPEFINRLFEIEGVKSIFYVLDFISIDKEDNANWNELLPQIENTF-
General information:
TITO was launched using:
RESULT:
Template:
2K1H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33439 for 494 contacts (-67.7/contact) +
2D Compatibility (PS) -8880 + (NN) -3439 + (LL) 104
1D Compatibility (HY) -9200 + (ID) 2400
Total energy: -57254.0 ( -115.90 by residue)
QMean score : 0.459
(partial model without unconserved sides chains):
PDB file :
Tito_2K1H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K1H-query.scw
PDB file :
Tito_Scwrl_2K1H.pdb
: