Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKTVVRKNESLEDALRRFKRSVSKSGTIQEVRKREFYEKPSVKRKKKSEAARKRKFK
4A2I Chain:U ((5-51))
-----VRENEPFDVALRRFKRSCEKAGVLAEVRRREFYEKPTTERKRAKASA------
General information:
TITO was launched using:
RESULT:
Template:
4A2I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 11475 for 185 contacts (62.0/contact) +
2D Compatibility (PS) -4569 + (NN) 1320 + (LL) 1012
1D Compatibility (HY) -3200 + (ID) 1350
Total energy: 4688.0 ( 25.34 by residue)
QMean score : 0.348
(partial model without unconserved sides chains):
PDB file :
Tito_4A2I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4A2I-query.scw
PDB file :
Tito_Scwrl_4A2I.pdb
: