Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITVDITVNDEGKVTDVIMDGHADHGEYGHDIVCAGASAVLFGSVNAIIGLTSERPDINYDD-NGGHFHI-RSVDTNN--DEAQLILQTMLVSLQTIEEEYNENIRLNYK
2G0J Chain:A ((7-104))
-------IRRKGILESVELTGHAGSGEYGFDIVCAAVSTLSMNLVNALEVLADCTVSLQMDEFDGGYMKIDLSYITNKSDEKVQLLFEAFLLGITNLAENSPEFV-----
General information:
TITO was launched using:
RESULT:
Template:
2G0J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31064 for 621 contacts (-50.0/contact) +
2D Compatibility (PS) -10310 + (NN) -6393 + (LL) 1188
1D Compatibility (HY) -9200 + (ID) 1550
Total energy: -57329.0 ( -92.32 by residue)
QMean score : 0.438
(partial model without unconserved sides chains):
PDB file :
Tito_2G0J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2G0J-query.scw
PDB file :
Tito_Scwrl_2G0J.pdb
: