Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNYLESLYWIHERTKFGIKPGVKRMEWMLAQFNNPQNNIKGIHVGGTNGKGSTVAYLRTALVENGYEVGTFTSPFIETFNERISLNGVPISNDAIVELVSRIKPVSE-MMERETDLGVATEFEIITAMMFLYFGEIHPVDFVIVEAGLGIKNDSTNVFTPVLSILTSIGLDHTDILGGTYLDIARDKGAIIKPNVPVIYAVKNEDALKYVRERAIEQHAKPIELDREIVVVSQ-----NDEFTYRYKDYELETIILSMLGEHQKQNAALAITALIELNEQGLIELDFNKMIDGIESVRWTGRIEQVHDKPLIILDGAHNSESIDALIDTIKQYHDKEKVDILFSAINGKPINEMVKHLSLIAHTFYATEFDFPKALRKEEIVGSIENDEIQLVDDYVEFIKNYQGDT----LVITGSLYFISEVKSKLDFEAL |
| 2GCB Chain:A ((1-423)) | MNYTETVAYIHSFPRLAKTGDHRRILTLLHALGNPQQQGRYIHVTGTNGKSTAANAIAHVLEASGLTVGLYTSPFIMRFNERIMIDHEPIPDAALVNAVAFVRAALERLQQQQADFNV-TEFEFITALGYWYFRQ-RQVDVAVIEVGIGGDTDSTNVITPVVSVLTSVALDHQKLLGHTITAIAKHKAGIIKRGIPVVTGNLVPDAAAVVAAKVATTGSQWLRFDRDFSVPKAKLHGWGQRFTYEDQDGRISDLEVPLVGDYQQRNMAIAIQTAKVYAKQTEWPLTPQNIRQGLAASHWPARLEKISDTPLIVIDGAHNPDGINGLITALKQLF-SQPITVIAGIL-------MADRLTAAFSTVYLVP--VPGTPRAL-----------RLKDSWQEALAASLNDVPDQPIVITGSLYLASAVRQTL----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GCB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -258585 for 3468 contacts (-74.6/contact) +
2D Compatibility (PS) -42546 + (NN) -14573 + (LL) 1468
1D Compatibility (HY) -28000 + (ID) 6850
Total energy: -349086.0 ( -100.66 by residue)
QMean score : 0.471
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