Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNECAFGTKDPVYLNYHDHVWGQPLYDSKALFKLLALESQHAGLSWLTILKKKEAYEEAFYDFEPEKVAQMTAQDIDRLMTFPNIVHHRKKLEAIVNQAQGYLKIEQAYGSFSKFLWSYVNGKPKDLQYEHASDRITVDDTATQLSKDLKQYGFKFLGPVTVFSFLEAAGLYDAHLKDCPSKPKHN
4AI5 Chain:A ((3-188))
MNECAFGTKDPVYLNFHDHVWGQPLYDSKALFKLLALESQHAGLSWLTILKKKEAYEEAFYDFEPEKVAQMTAQDIDRLMTFPNIVHHRKKLEAIVNQAQGYLKIEQAYGSFSKFLWSYVNGKPKDLQYEHASDRITVDDTATQLSKDLKQYGFKFLGPVTVFSFLEAAGLYDAHLKDCPSKPKHN
General information:
TITO was launched using:
RESULT:
Template:
4AI5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -90658 for 1445 contacts (-62.7/contact) +
2D Compatibility (PS) -19793 + (NN) -9999 + (LL) 0
1D Compatibility (HY) -26000 + (ID) 9250
Total energy: -155700.0 ( -107.75 by residue)
QMean score : 0.572
(partial model without unconserved sides chains):
PDB file :
Tito_4AI5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4AI5-query.scw
PDB file :
Tito_Scwrl_4AI5.pdb
: