Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPELPEVEHVKRGIEPYVINQKIEHV-IFSDKVIEGKAQGKETIIKGIELDTFKTLSEGYTITNVERRSKYIVFQLDNKREQRTLISHLGMAGGFFIVDELEDIMIPNYRKHWHVIFELSNDKKLIYSDIRRFGEIRNVAS--VASYPSFLEIAPEPFTNEALTYYLNRIHQQSNKNKPIKQVILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQQEMVFYYVREVLEEGIKHGGTSISDYRHADGKTGEMQLHLNVYKQP--VCKVCGSQIETKIIATRNSHYCPVCQK |
| 1L2B Chain:A ((2-274)) | -PELPEVETIRRTLLPLIVGKTIEDVRIFWPNIIRHPRDS----------EAFAARMIGQTVRGLERRGKFLKFLLDRD----ALISHLRMEGRYAVASALEPL-----EPHTHVVFCFTDGSELRYRDVRKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRS--VKALLLDQTVVAGFGNIYVDESLFRAGILPGRPAASLSSKEIERLHEEMVATIGEAVMKGGSTVR---------GTFQHHLYVYGRQGNPCKRCGTPIEKTVVAGRGTHYCPRCQR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1L2B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -116964 for 2046 contacts (-57.2/contact) +
2D Compatibility (PS) -27329 + (NN) -8177 + (LL) 2016
1D Compatibility (HY) -20000 + (ID) 4700
Total energy: -175154.0 ( -85.61 by residue)
QMean score : 0.392
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