Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFKDFFNRTKKKKYLTVQDSKNNDVPAGIMTKCPKCKKIMYTKELAENLNVCFNCDHHIALTAYKRIEAISDEGSFTEFDKGMTSANPLDFPSYLEKIEKDQQKTGLKEAVVTGTAQLDGMKFGVAVMDSRFRMGSMGSVIGEKICRIIDYCTENRLPFILFSASGGARMQEGIISLMQMGKTSVSLKRHSDAGLL-YISYLTHPTTGGVSASFASVGDINLSEPKALIGFAGRRVIEQTINEKLPDDFQTAEFLLEHGQLDKVVHRNDMRQTLSEILKIHQEVTK |
3N6R Chain:B ((54-227)) | ------------------------------------------------------------LTARERVDLLLDEGSFEEFDMFVTH-RCTDFNM------QDQKPAG--DGVVTGWGTINGRVVYVFSQDFTVLGGSVSETHSKKICKIMDMAMQNGAPVIGINDSGGARIQEGVDSLAGYGE--VFQRNIMASGVVPQISMIMGPCAGGAVYSPAMTDFIFMVKDSSYMFVTGPDVVKTVTNEQV----------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3N6R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -53013 for 1397 contacts (-37.9/contact) +
2D Compatibility (PS) -19131 + (NN) -7965 + (LL) 8356
1D Compatibility (HY) -8400 + (ID) 3000
Total energy: -83153.0 ( -59.52 by residue)
QMean score : 0.405
|
|
|