Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTIKVLFVDDHEMVRIGISSYLSTQSDIEVVGEGASGKEAIAKAHELKPDLILMDLLMEDMDGVEATTQIKKDLPQIKVLMLTSFIEDKEVYRALDAGVDSYILKTTSAKDIADAVRKTSRGESVFEPEVLVKMRNRMKKRAELYEMLTEREMEILLLIAKGYSNQEIASASHITIKTVKTHVSNILSKLEVQDRTQAVIYAFQHNLIQ
2RNJ Chain:A ((143-209))
----------------------------------------------------------------------------------------------------------------------------------------------ELYEMLTEREMEILLLIAKGYSNQEIASASHITIKTVKTHVSNILSKLEVQDRTQAVIYAFQHNLIQ
General information:
TITO was launched using:
RESULT:
Template:
2RNJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55650 for 471 contacts (-118.2/contact) +
2D Compatibility (PS) -7030 + (NN) -2059 + (LL) 11684
1D Compatibility (HY) -10400 + (ID) 3350
Total energy: -66805.0 ( -141.84 by residue)
QMean score : 0.735
(partial model without unconserved sides chains):
PDB file :
Tito_2RNJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RNJ-query.scw
PDB file :
Tito_Scwrl_2RNJ.pdb
: