Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRTLVLLITAIFILAACGNHKDDQAGKDNQKHNNSSNQVKEIATDKNVQGDNYRTLLPFKESQARGL-LQDNMANSYNGGDFEDGLLNLSKEVFPTDKYLYQDGQFLDKKTINAYLNPKYTKREIDKMSEKDKKDKKANENL-GLNPSHEGETNPEKIAEKSPAYLSNILEQDFYGGGDTKGKNIKGMTIGLAMNSVYYYKKEKDGPTFSKKLDDSEVKKQGKQMASEILSRLRENDDLKDIPIHFAIYKQSSEDSITPGEFITQATAEKSQTKLNEWHNINEKSALLPSSTAADY-DENLNNNFKQFNDNLQSYFSNFTQAVGKVKFVDKKPQRLVVDLPIDYYGQAETIGITQYVTEQANKYFDKIDNYEIRI--KDGNQPRALISKTKDDKEPQVHIYSN |
| 3IB5 Chain:A ((28-345)) | -----------------------------------------------------------YKTSKSRGVGISQNSDNLLNLKSFEAGLTTISKDHFSTKSYIFQEGQYLNKATIQDWLG------------------RKSSSNPEGLNPSDNGKKEANK---RNPIYVQQIEEQDYMKQNNGK-LELAGMTIGIGMNQKDYYQKEQYGATYSTTISKEKRIEEGKIAAKKVLARVRQKVG-NNVPIVIAMFAQAPNDSLVGGYFYS-YTVSKSGTDIGSWTETNIKSYVLPATEDNKLPNDNDSTSFDNFQKEVKNFFPNISNVTGQGQYKDKTLQGLHITITTQFYSETEITSFTQYVAQAAKSYLPSGIPVDIKINGSDG-ETQSFVSTTGGNGGYYTHVF-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IB5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9925 for 2364 contacts (-4.2/contact) +
2D Compatibility (PS) -32944 + (NN) -7133 + (LL) 4708
1D Compatibility (HY) -20800 + (ID) 5150
Total energy: -71244.0 ( -30.14 by residue)
QMean score : 0.364
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