Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLEHITKKYGSNVVLNDIDFDFGDSRIVGLIGKNGVGKTTIMKVMNGNIIKFDGKVDIDNAD------------NIGFLIEHPKLYDNKSGLYNLKLFAQVL----GKGFDK----AYTDKIIDAFGMRPYIKKKVKKYSMGMKQKLAIAVSLMNKPKFLILDEPTNGMDPDGSIDVLTTIKSLVNELDMRILISSHKLEDIELICDRAVFLRDGHFVQDVNMEVGVASDTTIVTVDHKDFDRTEKYLAEHFQLQNVDKADGHLMINAQKNYQVILKALSELDIYPKYIETRKSSLRDTYFNINQRGDK |
| 4WBS Chain:A ((42-282)) | --VRNLKKRYGSRTVVKDVSLDVKSGEVVGLLGPNGAGKTTSFYMIVGLVPLDAGEIDLDGKSISLLPIHKRASLGLSYLPQEASVFRKLSVEENIRAVLELQVGDDGKRLSKDAIASRTEALLDELQISHLRENPALSLSGGERRRVEIARALATNPSFILLDEPFAGVDPIAVLEIQKIVKFL-KQRNIGVLITDHNVRETLGICDHAYIISDGSV-----LAAGAPGD----IIENESVRRV--YLGEHFRM------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WBS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -138510 for 1727 contacts (-80.2/contact) +
2D Compatibility (PS) -23628 + (NN) -5361 + (LL) 5076
1D Compatibility (HY) -16000 + (ID) 3100
Total energy: -181523.0 ( -105.11 by residue)
QMean score : 0.544
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