Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNDSNQGLQANPQYTIHYLSQEITRLTQENAMLKAYIQEQNEKSKSAEEE
3HE5 Chain:B ((5-28))
-----------------YLRKKIARLKKDNLQLERDEQNLE---------
General information:
TITO was launched using:
RESULT:
Template:
3HE5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1136 for 86 contacts (13.2/contact) +
2D Compatibility (PS) -2743 + (NN) -1150 + (LL) 1256
1D Compatibility (HY) -800 + (ID) 400
Total energy: -2701.0 ( -31.41 by residue)
QMean score : 0.634
(partial model without unconserved sides chains):
PDB file :
Tito_3HE5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HE5-query.scw
PDB file :
Tito_Scwrl_3HE5.pdb
: