Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYETYHSGWIECITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISKASEIMTHNLTN-----VDVIGIDEVQFFDDEIVSIVEKLSADGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAVCAVCGSSSSRTQRLINGKPAKIDDPIILVGANESYEPRCRAHHIVAPSDNNKEEL
2B8T Chain:A ((12-197))
-------GWIEFITGPMFAGKTAELIRRLHRLEYADVKYLVFKPKIDTRSIR-NIQSRTGTSLPSVEVESAPEILNYIMSNSFNDETKVIGIDEVQFFDDRICEVANILAENGFVVIISGLDKNFKGEPFGPIAKLFTYADKITKLTAICNECGAEATHSLRKIDGKHADYNDDIVKIGCQEFYSAVCRHHHKV----------
General information:
TITO was launched using:
RESULT:
Template:
2B8T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79845 for 1375 contacts (-58.1/contact) +
2D Compatibility (PS) -19862 + (NN) -9270 + (LL) 856
1D Compatibility (HY) -18000 + (ID) 4200
Total energy: -130321.0 ( -94.78 by residue)
QMean score : 0.456
(partial model without unconserved sides chains):
PDB file :
Tito_2B8T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2B8T-query.scw
PDB file :
Tito_Scwrl_2B8T.pdb
: