Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMEVCPYLEETFKILGRSWNGLIINYLSRCNDCSAHFSDMKRDLKTITPRALSLKLSELAQWELVEKQIISTSPVQIIYVLTEKGKALAEALHPIEAWAQSYVDLTDQRTAK
4A5M Chain:A ((14-109))
----CP-VEFTLDVIGGKWKGILFYHMI---DGKKRFNEFRRICPSITQRMLTLQLRELEADGIVHREVYHQVPPKVEYSLTEFGRTLEPIVLQMKEWGESNRD--------
General information:
TITO was launched using:
RESULT:
Template:
4A5M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55926 for 605 contacts (-92.4/contact) +
2D Compatibility (PS) -10602 + (NN) -3849 + (LL) 1512
1D Compatibility (HY) -8400 + (ID) 1450
Total energy: -78715.0 ( -130.11 by residue)
QMean score : 0.608
(partial model without unconserved sides chains):
PDB file :
Tito_4A5M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4A5M-query.scw
PDB file :
Tito_Scwrl_4A5M.pdb
: