Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPLVSMKEMLIDAKENGYAVGQYNINNLEFTQAILEASQEENAPVILGVSEGAARYMSGFYTIVKMVEGLMHDLNITIPVAIHLDHGSSFEKCKEAIDAGFTSVMIDASHSPFEENVATTKKVVEYAHEKGVSVEAELGTVGGQEDDVVAD-GIIYADPKECQELVEKTGIDALAPALGSVHGPYKGE--PKLGFKEMEEIGLSTGLPLVLHGGTGIP---------------------TKDIQKAIPFGTAKINVNTENQIASAKAVRDVLNNDKEVYDPRKYLGPAREAIKETVKGKIKEFGTSNRAK |
1RV8 Chain:A ((2-305)) | --LVTGLEILKKAREEGYGVGAFNVNNMEFLQAVLEAAEEQRSPVILALSEGAMKY--GGRALTLMAVELAKEARV--PVAVHLDHGSSYESVLRALRAGFTSVMIDKSHEDFETNVRETRRVVEAAHAVGVTVEAELGRLAGI-------KDALLTNPEEARIFMERTGADYLAVAIGTSHGAYKGKGRPFIDHARLERIARLVPAPLVLHGASAVPPELVERFRASGGEIGEAAGIHPEDIKKAISLGIAKINTDTDLRLAFTALIREALNKNPKEFDPRKYLGPAREAVKEVVKSRMELFGSVGRA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RV8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -88212 for 2426 contacts (-36.4/contact) +
2D Compatibility (PS) -30453 + (NN) -16437 + (LL) 972
1D Compatibility (HY) -19200 + (ID) 6750
Total energy: -160080.0 ( -65.99 by residue)
QMean score : 0.585
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