Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNILVIGANGGVGSLLVQQLA-KENVPFTAGVRQSDQLNALKSQGMKAILVDVENDSIETLTETFKPFDKVIFSVGSGGNTGADKTIIVDLDGAVKSMIAS-KEANIKHYVMVST--YDSRRQAFDDSGD----LKPYTIAKHYADDYLRRSGLNYTILHPGALTNAAGSGKIEAAQYFDGKGEIPREDVATVLKEIVTSNHFNHQEFQIISGEQDIKDALTQFEIEKD
3QVO Chain:A ((25-175))
-NVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHA--ALKQAMQGQDIVYANL-----TGED------LDIQANSVIAAMKACDVKRLIFVLSLG-------------IGEPLKPF----RRAADAIEASGLEYTILRPAWLTD---------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3QVO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -90860 for 952 contacts (-95.4/contact) +
2D Compatibility (PS) -13549 + (NN) -2109 + (LL) 5464
1D Compatibility (HY) -9200 + (ID) 2250
Total energy: -112504.0 ( -118.18 by residue)
QMean score : 0.569
(partial model without unconserved sides chains):
PDB file :
Tito_3QVO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QVO-query.scw
PDB file :
Tito_Scwrl_3QVO.pdb
: