Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLESKWGLRFIAFLLALFFFLSVNNVFGNIFNTGNLGQKSSKTIQDVPVEILYNTKDLHLTKAPETVNVTISGPQSKIIKIENPEDLRVVIDLSNAKAGKYQEKYQVKGLADDIHYSVKPKLANITLENKVTKKMTVQPDVSQSDIDPLYKITKQEVSPQTVKVTGGEEQLNDIAYLKATFKTNKKINGDTKDVAEVTAFDKKLNKLNVSIQPNEVNLQVKVEPFSKKVKVNVKQKGSLADDKELSSIDLEDKEIEIFGSRDDLQNISEVDAEVDLDGISESTEKTVKINLPEHVTKAQPSETKAYINVK |
2KXY Chain:A ((1-89)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KISLRKLSKSVPVKLELTGDKASNVSSISYSFDRGHVTIVGSQEAMDKIDSITVPVDISQVTEDTSKTLELK-AEGVT-VQPSTVKVNLKV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KXY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13223 for 517 contacts (-25.6/contact) +
2D Compatibility (PS) -9257 + (NN) 4466 + (LL) 14672
1D Compatibility (HY) -7600 + (ID) 1250
Total energy: -12192.0 ( -23.58 by residue)
QMean score : 0.509
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