Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDFSNFFQNLSTLKIVTSILDLLIVWYVLYLLITVFKGTKAIQLLKGILVIVIGQQISMILNLTATSKLFDIVIQWGVLALIVIFQPEIRRALEQLGRGSFLKRYTSNTYSKDEEKLIQSVSKAVQYMAKRRIGALI-VFEKETGLQDYIETGIAMDSNISQELLINVFIPNTPLHDGAMIIQG--TKIAAAASYLPLSDSPKISKSLGTRHRAAVGISEVSDAFTVIVSEETGDISVTFDGKLRRDISNEIFEELLAEHWFGTRFQKKGVK |
| 3C1Y Chain:A ((46-157)) | --------------------------------------------------------------------------------------------------------------------------KALDDIINANFGALIFLVDDPKKYEDVIQGGFWLDTDFSAEKLYEL-----SKMDGAIVLSEDITKIYYANVHL-VPDPTIPTGETGTRHRTAERLAKQTGKVVIAVSRRRNIISLYY-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C1Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -76451 for 792 contacts (-96.5/contact) +
2D Compatibility (PS) -11834 + (NN) -2978 + (LL) 14192
1D Compatibility (HY) -8000 + (ID) 1600
Total energy: -86671.0 ( -109.43 by residue)
QMean score : 0.335
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