Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLENQLAELKYDYVRLQGDLEKRESLN-LDTSALVRQLKDIENEIRNVRAQMQD
3TNU Chain:A ((347-392))
--------SQLSMKASLENSLEETKGRYCMQLAQIQEMIGSVEEQLAQLRCEME-
General information:
TITO was launched using:
RESULT:
Template:
3TNU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4554 for 169 contacts (26.9/contact) +
2D Compatibility (PS) -4870 + (NN) -2520 + (LL) 744
1D Compatibility (HY) -1200 + (ID) 300
Total energy: -3592.0 ( -21.25 by residue)
QMean score : 0.533
(partial model without unconserved sides chains):
PDB file :
Tito_3TNU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TNU-query.scw
PDB file :
Tito_Scwrl_3TNU.pdb
: