Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKDVKALKLMTLNDVLSQINGDMTLGIGTGSTMELLLPQMAQLIKERGYNITGVCTSNKIAFLAKELGIKICEINDVDHIDLAIDGADEVDPSLNIIKGGGGALFREKVIDEMASRFVVVVDETKIVQYLGETFKLPVEVDKFNWYHILRKIESYADIKVERRVNEDVAFI-TDNGNYILDCKLPKGIDPYKFHEYLIHLTGVFETGYFLDMADQVIVGTQEGVKILEK
4GMK Chain:A ((7-226))------LKQLVGTKAVEWIKDGMIVGLGTGSTVKYMVDALGKRVNEEGLDIVGVTTSIRTAEQAKSLGIVIKDIDEVDHIDLTIDGADEISSDFQGIKGGGAALLYEKIVATKSNKNMWIVDESKMVDDLGQ-FPLPVEVIPYGSGTVFKRFEEKG-LNPEFRKNEDGSLLHTDSDNYIIDLHLGKIENPKELGDYLINQVGVVEHGLFLDIVNTVIVGRQDGPEVLE-


General information:
TITO was launched using:
RESULT:

Template: 4GMK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -155155 for 1861 contacts (-83.4/contact) +
2D Compatibility (PS) -23850 + (NN) -9885 + (LL) 636
1D Compatibility (HY) -18400 + (ID) 4600
Total energy: -211254.0 ( -113.52 by residue)
QMean score : 0.564

(partial model without unconserved sides chains):
PDB file : Tito_4GMK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4GMK-query.scw
PDB file : Tito_Scwrl_4GMK.pdb: