Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIRNRVMNSVVNKYLLHNRSIMFKNDQDVERFFYKREIENRKKHKQPST---LNV-KANLEKLSL---DDMQVFRFNFRH-----------QIDKKILYIHGGFNALQPSPFHWRLLDKITLSTLYEVVLPIYPKTPE----FHIDDTFQAIQRVYDQLVSEVGHQNVVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDATLSNKDISDALIEQDAVLSQFGVNEIMKKWANGLPLTDKRISPINGTIEGLPPVYMFGGGREMTHPDMKLFEQMMLQHHQYIEFYDYPKMVHDFPIYPIRQSHKAIKQIAKSIDEDVTQNN |
| 3G9T Chain:A ((14-239)) | ----------------------------------------REKAVPPGTEVPLDVMRKGMEKVAFKAADDIQVEQVTVAGCAAEWVRAPGCQAGKAILYLHGGGYVMGSINTHRSMVGEISRASQAAALLLDYRLAPEHPFPAAVEDGVAAYRWLLDQGFKP---QHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWADMTCTN-DSFKTRAEADPM--PGGINKMAARYLNGADAKHPYASPNFANLKGLPPLLIHVGRDEV---------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3G9T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -89289 for 1549 contacts (-57.6/contact) +
2D Compatibility (PS) -21145 + (NN) -9377 + (LL) 8156
1D Compatibility (HY) -7200 + (ID) 3100
Total energy: -121955.0 ( -78.73 by residue)
QMean score : 0.497
|
|
|