Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYVENSYLSKQLCFLFYVSSKEIIKKYTNYLKEYDLTYTGYIVLMAIENDEKLNIKKLGERVFLDSGTLTPLLKKLEKKDYVVRTREEKDERNLQISLTEQGKAIKSPLAEISVKVFNEFNISEREASDIINNLRNFVSKNFDYSDRK
4GXO Chain:A ((5-139))
------YLSKQLEFLFYVSSKEIIKKYTNYLKEYDLTYTGYIVLMAIENDEKLNIKKLGERVFLDSGTLTPLLKKLEKKDYVVRTREEKDERNLQISLTEQGKAIKSPLAEISVKVFNEFNISEREASDIINNLRNFVSKN-------
General information:
TITO was launched using:
RESULT:
Template:
4GXO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60099 for 812 contacts (-74.0/contact) +
2D Compatibility (PS) -13917 + (NN) -94 + (LL) 696
1D Compatibility (HY) -20000 + (ID) 6700
Total energy: -100114.0 ( -123.29 by residue)
QMean score : 0.489
(partial model without unconserved sides chains):
PDB file :
Tito_4GXO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4GXO-query.scw
PDB file :
Tito_Scwrl_4GXO.pdb
: