Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKKLLTLFIVSMLILTACGKKESATTSSKNGKPLVVIYGDYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFVNLAFLGKDSIVGSRASHAVLMYAPKSFLDFQKQLFAAQQDENKEWLTKELLDKHIKQLHLDKETENKIIKDYKTKDSKSWKAAEKDKKIAKDNHIKTTPTAFINGEKVEDPYDYESYEKLLKDKIK
3BCK Chain:A ((14-177))
-------------------------------GKPLVVVYGDYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFVNLAFLGKDSIVGSRASHAVLMYAPKSFLDFQKQLFAAQQDENKEWLTKELLDKHIKQLHLDKETENKIIKDYKTKDSKSWKAAEKDKKIAKDNHIKTVPTAFINGEKVEDPYDYESYEKLLK----
General information:
TITO was launched using:
RESULT:
Template:
3BCK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50542 for 1304 contacts (-38.8/contact) +
2D Compatibility (PS) -17609 + (NN) -8246 + (LL) 2948
1D Compatibility (HY) -21600 + (ID) 8100
Total energy: -103149.0 ( -79.10 by residue)
QMean score : 0.684
(partial model without unconserved sides chains):
PDB file :
Tito_3BCK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BCK-query.scw
PDB file :
Tito_Scwrl_3BCK.pdb
: