Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKIKYILVVFVLSLTVLSGCSLPGLGSKSTKNDVKITALSTSESQIISHMLRLLIEHDTHGKIKPTLVNNLGSSTIQHNALINGDANISGVRYNGTDLTGALKEAPIKDPKKAMIATQQGFKKKFDQTFFDSYGFANTYAFMVTKETAKKYHLETVSDLAKHSKDLRLGMDSSWMNRKGDGYEGFKKEYGFDFGTVRPMQIGLVYDALNTEKLDVALGYSTDGRIAAYDLKVLKDDKQFFPPYAASAVATNELLRQHPELKTTINKLTGKISTSEMQRLNYEADGKGKEPAVVAEEFLKKHHYFDKQKGGHK
3PPO Chain:A ((40-311))--------------------------------DTIKIGAQSMTESEIVANMIAQLIEHDTD--LNTALVKNLGSNYVQHQAMLGGDIDISATRYSGTDLTSTLGKEAEKDPKKALNIVQNEFQKRFSYKWFDSYGFDNTYAFTVTKKFAEKEHINTVSDLKKNASQYKLGVDNAWLKRKGDGYKGFVSTYGFEFGTTYPMQIGLVYDAVKNGKMDAVLAYSTDGRIKAYDLKILKDDKRFFPPYDCSPVIPEKVLKEHPELEGVINKLIGQIDTETMQELNYEVDGKLKEPSVVAKEFLEKHHYFD-------


General information:
TITO was launched using:
RESULT:

Template: 3PPO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97411 for 2349 contacts (-41.5/contact) +
2D Compatibility (PS) -28959 + (NN) -6470 + (LL) 2252
1D Compatibility (HY) -26400 + (ID) 7950
Total energy: -164938.0 ( -70.22 by residue)
QMean score : 0.480

(partial model without unconserved sides chains):
PDB file : Tito_3PPO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PPO-query.scw
PDB file : Tito_Scwrl_3PPO.pdb: