Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEKEKMLAEKWYDANFDQDLINERARAKDICFELNHTKPSDTNKRKELIDQLFQTTTDNVSISIPFDTDYGWNVKLGKNVYVNTNCYFMDGGQITIGDNVFIGPNCGFYTATHPLNFYHRNEGYEKAGPIHIGSNTWFGGHVAVLPGVTIGEGSVIGAGSVVTKDIPPHSLAVGNPCKVVRKIDNDLPSETLNDETIK
4DCL Chain:A ((1-188))
MTEKEKMLAEKWYDANFDQTLINERLRAKVICFALNHTNPSATLKRKVLIDALFQTTTDNVSISIPFDTDYGWNVKLGKNVYVNTNCYFMDGGQITIGDNVFIGPNCGFYTATHPLNFHHRNEGFEKAGPIHIGSNTWFGGHVAVLPGVTIGEGSVIGAGSVVTKDIPPHSLAVGNPCKVVRKIDNDL-----------
General information:
TITO was launched using:
RESULT:
Template:
4DCL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103268 for 1486 contacts (-69.5/contact) +
2D Compatibility (PS) -20829 + (NN) -13424 + (LL) 432
1D Compatibility (HY) -24800 + (ID) 8850
Total energy: -170739.0 ( -114.90 by residue)
QMean score : 0.609
(partial model without unconserved sides chains):
PDB file :
Tito_4DCL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4DCL-query.scw
PDB file :
Tito_Scwrl_4DCL.pdb
: