Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLNKEQRRITAEELQAHFEESTLSVQMIAEKLNVTTEDVEKVLAMTAPLGIFSHQLQRFIHLVWDVR--DVINDNIKGNGQTPEPYTYLKGEKEDYWFLR
1NXU Chain:A ((2-64))
--------KVTFEQLKAAFNRVLISRGVDSE----TADACAEMFARTTESGVYSHGVNRFPRFIQQLENGDIIPD--------------------------
General information:
TITO was launched using:
RESULT:
Template:
1NXU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15930 for 387 contacts (-41.2/contact) +
2D Compatibility (PS) -6309 + (NN) -931 + (LL) 1932
1D Compatibility (HY) -4400 + (ID) 900
Total energy: -26538.0 ( -68.57 by residue)
QMean score : 0.284
(partial model without unconserved sides chains):
PDB file :
Tito_1NXU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1NXU-query.scw
PDB file :
Tito_Scwrl_1NXU.pdb
: