Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIYQKQRNTAETQLNISIS-DDQSPSHINTGVGFLNHMLTLFTFHSGLSLNIEAQGDIDVDDHHVTEDIGIVIGQLLLEMIKDKKHFVRYGTMYIPMDETLARVVVDISGRPYLSFNASLSKEKVGTFDTELVEEFFRAVVINARLTTHIDLIRGGNTHHEIEAIFKAFSRALGIALTATDDQRVPSSKGVIE
4MU0 Chain:A ((10-191))
-IGEVKRETKETNVSVKINLDGHGVSDSSTGIPFLDHMLDQLASHGLFDVHVRATGDTHIDDHHTNEDVALAIGTALLKALGERKGINRFGDFTAPLDEALIHVSLDLSGRPYLGYNLEIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLAGKNSHHIIEATFKAFARALRQA-TESDPRR---------
General information:
TITO was launched using:
RESULT:
Template:
4MU0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -144542 for 1544 contacts (-93.6/contact) +
2D Compatibility (PS) -19197 + (NN) -7658 + (LL) 772
1D Compatibility (HY) -12000 + (ID) 3850
Total energy: -186475.0 ( -120.77 by residue)
QMean score : 0.486
(partial model without unconserved sides chains):
PDB file :
Tito_4MU0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MU0-query.scw
PDB file :
Tito_Scwrl_4MU0.pdb
: