Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKPFSKLFGLKNKDDIIGHIEEDRNSNVESIQIERIVPNRYQPRQVFEPNKIKELAESIHEHGLLQPIVVRPIEEDMFEIIAGERRFRAIQSLNLPQADVIIRDMDDEETAVVALIENIQRENLSVVEEAEAYKKLLEIGDTTQSELAKSLGKSQSFIANKLRLLKLAPKVLLRLREGKITERHARAVLSLSDSEQEALIEQVIAQKLNVKQTEDRVRQKTGPEKVKAQNLRFAQDVTQARDEVGKSIQAIQQTGLHVEHKDKDHEDYYEIKIRIYKR |
| 1R71 Chain:A ((27-91)) | -------------------------------------------------------------------------------------------------------------------VIENLQRNELTPREIADFIGRELAKG-KKKGDIAKEIGKSPAFITQHVTLLDLPEKIADAFNTGRV-------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R71.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15357 for 392 contacts (-39.2/contact) +
2D Compatibility (PS) -7204 + (NN) -6283 + (LL) 17160
1D Compatibility (HY) -4400 + (ID) 1100
Total energy: -17184.0 ( -43.84 by residue)
QMean score : 0.825
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