Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKFLFKQKFCESLPKSFSKTLLALSLGLILLGVFIPFPKVPKHQSVPLALHFTEHYARFIPTILSVAIPLIQRDAVGLFQVANASIATTFLTHATKRALNHVTINDQRL--GE---RPYGGNFNMPSGHSSMVGLAVAFLMRRYSVKKYLWLLPLIPLTMLARIYLDMHTIGAVLAGLGTGMLCVGLFTSPKNLN |
1D2T Chain:A ((108-211)) | -----------------------------------------------------------------------------------------DLATRSAKDHYMRIRPFAFYGVSTCNTQDKLSKNGSYPSGHTSIGWATALVLAEINPQRQN-EILKRGYELGQSRVICGYHWQSDVDAARVVGSAVVATLHTNPAFQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1D2T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -49777 for 709 contacts (-70.2/contact) +
2D Compatibility (PS) -10213 + (NN) -4008 + (LL) 7808
1D Compatibility (HY) 2000 + (ID) 800
Total energy: -54990.0 ( -77.56 by residue)
QMean score : 0.287
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