Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MMFHKALITFIVLWFFLNGLGAYDFKHCQAFFKKASLQKGGVALKELPKGVYLYYSKTYPKHAKVIKSDPFIGLYLLQSAPSEYVYTLRDLDKDAL--------IRPMASIGANQATEARLLVGQKG-----YDRYAQIS---QKTQKNGVISNICYQMLGLGV------GGN---GF-IETKFIKRFLNQQEPY----YGDIGVRLEERHKRL-----VVAQFDPF----FPKNPFLK-----NDEILAINDYKIHSLAEFEWVVSNLSYQSLAKVKIKRNHQIKEVTLKVNKRYGGFLLKDTFL------ERYGIALDERFIITKIGAHLPKGLDFLKLGDRILWVNHKSVSFNPKALREAL-STPKIELLVWRQGFEFYIKVR |
3MH6 Chain:A ((124-439)) | -------------------------------------------------------------DAKMVGKDPRSDIALIQIQNPKNLTAIKMADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGRSGLNAENYENFIQTDAAINRGNSGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNLTSQMVEYGQVKRGELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQSSQNQVDSSSIFNGIEGAEMSNKGKDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVK-NIAELRKVLDSKPSVLALNIQRGDSTIYLLM |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MH6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -46883 for 1825 contacts (-25.7/contact) +
2D Compatibility (PS) -27594 + (NN) -1278 + (LL) 5016
1D Compatibility (HY) -7200 + (ID) 3350
Total energy: -81289.0 ( -44.54 by residue)
QMean score : 0.214
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