Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MCNDATLLNKITLFGVVQGVGMRPFVYILAQKLGLVGFVRN-AQAALEIVLPAHKT--ESFLNALKKGLPPLALVEKII---ISPYDKALHFNDFRILESKNHPLNLLSQIPKDLGVCEDCLCEIRDKNSPYFHYAFNSCAKCGARYSLLNAMPYDRENSALKPFKLCKFCASVYKDAHNKRFHIQGISCKKCGIALNYKRFKND------DALLECAKDIQKGKIIALKGLGGFALLCDARNFKTIERLRLLKNRPLKPFALMFKDLNAAKQHAFLNALECESLNSVSAPILLARKKPDTQLAPNIAKNSPFYGVILPYTPLHALLLDLLDSPI-VFTSANFSSLPLASD-EKEIDSLHFIFDFKLTHNRTIIHRIDDSIAQRVDNAIRPMRLVRGFAPLYLTLPKRSFNAPKKILALGAEQKGHFSLLDSETSVLLLSPFCGDLSVLENEKHFKETLNFFLKTYDFKP-TLLACDEHQNYTTTKMAF----DFNTPLLQVQHHHAHFLASVLDALLQDPHLNHPFIGIVWDGSG-AYENKIYGAECFVGDLERIEEVARFEEFWLLGGQKAIKEPRRLVLEI--------ALKHQLNKLLKRVQKHFK--EDELGIFKQMHDKKIQSVATNSIGRLFDIVAFSLGVVGTISFEAESGQVLENLALQSDEIAFYPFEIKNSVVRLKEFYQAFEKDLGVLEPKRI--------AKKFFNSLVEIITALIAPFKGHVVVCSGGVFCNQLLCEQLAKRLKKLQREYFFHKHFPPNDSSIPVGQALMAYFNPTIIKKG |
| 4G9I Chain:A ((6-757)) | ----------IHVQGIVQAVGFRPFVYRIAHEHNLRGYVKNLGDAGVEIVVEGREEDIEAFIEDLYKKKPPLARIDRIEKKEIPPQG----FDRFYIEKSS------DSIIPPDIAICDDCLRELFDPTNKRYMYPFIVCTNCGPRFTIIEDLPYDRENTTMKEFPMCDFCRSEYEDPLNRRYHAEPTACPVCGPS--YRLYTSDGQEIYGDPLRKAAELIDKGYIVAIKGIGGIHLACDAANEEVVAELRRRTFRPQKPFAIMAKDIETVKSFAYVSPEEEEELTSYRRPIITLRKKEPFPLPENLAPGLHTIGVMLPYAGTHYILFHWSKTPVYVMTSANYPGMPMVKDNERAFEELKDVADYFLLHNRKILNRADDSVIRFVDGKRAVIRRSRGFVPLPIEIP-FEYNG----LAVGAELMNAFGV--AKNGKVYPSQYIGNTGKVEVLEFMREAIAHFRKILRVKNLDLIIADLHPAYNTTKLAMEMANELDVELLQVQHHYAHIASVMAEKNLDS------VIGIALDGVGYGTDGNTWGGEVLYLGYEDVERLAHIDYYPLPGGDLASYYPLRALMGILSKVYSIDELEGVINRCCPKAVESLKYGKVEFNVVLNQLAKGINTAYASSTGRVLDAIAVLLNVAYRRHYEGEPAMKLESFAFKGKNDLKFEVPVEGELIRVEELFQSILEAIEGASPADIAYSAHLALARAFAHTAVERARE----FGVKNVALSGGVAYNELITKMIRKVVEANGLNFHVTTEVPRGDNGVNVGQAFLGGLYLEGYLTK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4G9I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -420883 for 6352 contacts (-66.3/contact) +
2D Compatibility (PS) -74782 + (NN) -24724 + (LL) 1904
1D Compatibility (HY) -49600 + (ID) 12150
Total energy: -580235.0 ( -91.35 by residue)
QMean score : 0.397
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